Publications

See my Google Scholar page for the most up-to-date list of our publications.

Preprints

Lipshutz S.E., Hibbins M.S., Bentz A.B., Buechlin A.M., Empson T.A., George E.M., Hauber M.E., Rusch D.B., Schelsky W.M., Thomas Q.K., Torneo S.J., Turner A.M., Wolf S.E., Woodruff M.J., Hahn M.W., Rosvall K.A. 2024. Phylotranscriptomics reveals convergent behavioral evolution associated with shared and unique mechanisms in cavity-nesting songbirds.. BioRxiv.

Hibbins M.S., Rifkin J.L., Choudhury B.I, Voznesenka O., Sacchi B.M., Yuan M., Gong Y., Barrett S.C.H., Wright S.I. 2023. Phylogenomics resolves key relationships in Rumex and uncovers a dynamic history of independently evolving sex chromosomes.. BioRxiv.

Peer-reviewed journal articles

Hibbins M.S., Hahn M.W. 2024. Distinguishing between histories of speciation and introgression using genomic data.. Bulletin of the Society of Systematic Biologists 3(1).

Hibbins M.S., Breithaupt L.C., Hahn M.W. 2023. Phylogenomic comparative methods: accurate evolutionary inferences in the presence of gene tree discordance. PNAS 120(22): e2220389120.

Hibbins M.S., Hahn M.W. 2022. Phylogenomic approaches to detecting and characterizing introgression. Genetics 220(2): iyab173.

Hibbins, M.S., Hahn M.W. 2021. The effects of introgression across thousands of quantitative traits revealed by gene expression in wild tomatoes. PLoS Genetics 17(11): e1009892

Hibbins M.S., Gibson M.J.S, Hahn M.W. 2020. Determining the probability of hemiplasy in the presence of incomplete lineage sorting and introgression. eLife 9: e63753.

Vanderpool D., Minh B.Q., Lanfear R., Hughes D., Murali S., Harris R.A., Raveendran M., Muzny D.M., Hibbins M.S., Williamson R.J., Gibbs R.A., Worley K.C., Rogers J., Hahn M.W. 2020. Primate phylogenomics uncovers multiple rapid radiations and ancient interspecific introgression. PLoS Biology 18(12): e3000954

Hamlin J.A.P., Hibbins M.S., Moyle L.C. 2020. Assessing biological factors affecting post-speciation introgression. Evolution Letters 4(2): 137-154.

Hahn M.W. & Hibbins M.S. 2019. A three-sample test for introgression. Molecular Biology and Evolution, 36(12): 2878-2882.

Hibbins M.S. & Hahn M.W. 2019. The timing and direction of introgression under the multispecies network coalescent. Genetics 211(3): 1059 – 1073.

Rouard M., Droc G., Martin G., Sardos J., Hueber Y., Guignon V., Cenci A., Geigle B., Hibbins M.S., Yahiaoui N., Baurens F.C, Berry V., Hahn M., D’Hont A., Roux N. 2018. Three new genome assemblies support a rapid radiation in Musa acuminata (wild banana). Genome Biology and Evolution 10(12): 3129 – 3140.